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Hindi Journal of Applied Bioinformatics & Computational BiologyISSN: 2329-9533
SK Chakrabarti Author
Subjects of specialization
Affiliation
Molecular profiling, pathogens, Genome sequences, Gene expression
ICAR-Central Potato Research Institute, Shimla-171001, Himachal Pradesh, India
Biography
Dr. Chakrabarti SK previously held many positions i.e. Director, ICAR-Central Tuber Crops Research Institute, Kerala from 2012 to 2016 and Head-Plant Protection from 2009 to 2012. He worked as a Principal Scientist in department of Biotechnology in 2006 -2009) he worked as a Senior Scientist from 1998-2006 and he worked as a Scientist (Sr. Scale) from 1991-1998.
Publications
Research Article Subscription
Computational Analysis of Short Tandem Repeat (STR) Markers from Genome Wide Expression Regions of Sugar Beet (Beeta vulgaris)
Author(s): Virupaksh U Patil, Vanishree G, Vivek Hegde, KK Chaturvedi and SK Chakrabarti
Computational Analysis of Short Tandem Repeat (STR) Markers from Genome Wide Expression Regions of Sugar Beet (Beeta vulgaris)
Using transcriptome and expressed sequence tags (EST) data to extract short Tandem Repeats (STRs) also called Simple Sequence Repeats (SSRs) or microsatellites and develop markers has progressively become prevalent as number of sequencing data for various crops under public domain is mounting astonishingly. In the present study we have explored the genome-wide expression/genic STRs from sugar beet. Our in silico analysis results showed that among the 225,152 STRs present in the genome, only 12,881 were identified as transcript/genic markers. Of the total... view more»
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