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Hindi Journal of Applied Bioinformatics & Computational BiologyISSN: 2329-9533
Vanishree G Author
Subjects of specialization
Affiliation
Crop Improvement, Genetic Enhancement, Bioinformatics, Plant Breeding
ICAR-Central Potato Research Institute, Shimla-171001, Himachal Pradesh, India
Biography
Dr. G. Vanishree Patil is currently working as a Scientist in Division of Crop Improvement Central Potato Research institute at bemloe, Shimla. She received Ph.d from IARI, New Delhi in 2008. She persude M. Sc (Agril) Plant Pathology from IARI, New Delhi in 2008. Her current institute projects includes Management and Enhancement of potato germplasm, Breeding to evolve trait specific varieties for productivity, quality and resistance to biotic and abiotic stresses.
Publications
Research Article Subscription
Computational Analysis of Short Tandem Repeat (STR) Markers from Genome Wide Expression Regions of Sugar Beet (Beeta vulgaris)
Author(s): Virupaksh U Patil, Vanishree G, Vivek Hegde, KK Chaturvedi and SK Chakrabarti
Computational Analysis of Short Tandem Repeat (STR) Markers from Genome Wide Expression Regions of Sugar Beet (Beeta vulgaris)
Using transcriptome and expressed sequence tags (EST) data to extract short Tandem Repeats (STRs) also called Simple Sequence Repeats (SSRs) or microsatellites and develop markers has progressively become prevalent as number of sequencing data for various crops under public domain is mounting astonishingly. In the present study we have explored the genome-wide expression/genic STRs from sugar beet. Our in silico analysis results showed that among the 225,152 STRs present in the genome, only 12,881 were identified as transcript/genic markers. Of the total... view more»
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